Difference between revisions of "YwjH"
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| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywjH_3807754_3808392_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:ywjH_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywjH_3807754_3808392_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:ywjH_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU37110]] |
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Revision as of 14:49, 16 May 2013
- Description: transaldolase
| Gene name | ywjH |
| Synonyms | |
| Essential | no |
| Product | transaldolase |
| Function | pentose phosphate pathway |
| Gene expression levels in SubtiExpress: ywjH | |
| Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
| MW, pI | 22 kDa, 5.876 |
| Gene length, protein length | 636 bp, 212 aa |
| Immediate neighbours | murAB, fbaA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
carbon core metabolism, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU37110
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate (according to Swiss-Prot)
- Protein family: Type 3B subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- forms decamers (dimer of pentamers) PubMed
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- UniProt: P19669
- KEGG entry: [3]
- E.C. number: 2.2.1.2
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- for expression, purification in E. coli with N-terminal Strep-tag, in pGP172: pGP819, available in Stülke lab
- pGP1790 (expression of ywjH in B. subtilis, in pGP1389), available in Stülke lab
- GP1409 (ywjH-Strep (spc)) & GP1411 (ywjH-Strep (cat)), purification from B. subtilis, for SPINE, available in Stülke lab
- lacZ fusion:
- GFP fusion:
- two-hybrid system: B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Stülke lab
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
