Difference between revisions of "MenD"
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Revision as of 14:23, 16 May 2013
- Description: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / 2-oxoglutarate decarboxylase
| Gene name | menD |
| Synonyms | |
| Essential | yes PubMed |
| Product | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / 2-oxoglutarate decarboxylase |
| Function | biosynthesis of menaquinone |
| Gene expression levels in SubtiExpress: menD | |
| Metabolic function and regulation of this protein in SubtiPathways: Menaquinone | |
| MW, pI | 63 kDa, 5.655 |
| Gene length, protein length | 1740 bp, 580 aa |
| Immediate neighbours | ytxM, menF |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
biosynthesis of cofactors, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU30820
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Isochorismate + 2-oxoglutarate = 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate + CO2 (according to Swiss-Prot)
- Protein family: MenD subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): thiamine pyrophosphate, divalent metal ion such as Mn(2+)) PubMed
- Effectors of protein activity:
Database entries
- UniProt: P23970
- KEGG entry: [3]
- E.C. number: 2.2.1.9
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
