Difference between revisions of "CwlP"

From SubtiWiki
Jump to: navigation, search
Line 29: Line 29:
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yomI_2249154_2256011_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:cwlP_expression.png|500px]]
+
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yomI_2249154_2256011_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:cwlP_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21350]]
 
|-
 
|-
 
|}
 
|}

Revision as of 13:40, 16 May 2013

  • Description: cell wall hydrolase of the SP-beta prophage region,

Gene name cwlP
Synonyms yomI
Essential no
Product cell wall hydrolase
Function cell wall turnover
Gene expression levels in SubtiExpress: cwlP
MW, pI 252 kDa, 8.268
Gene length, protein length 6855 bp, 2285 aa
Immediate neighbours yomJ, yomH
Sequences Protein DNA DNA_with_flanks
Genetic context
YomI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CwlP expression.png
























Categories containing this gene/protein

cell wall degradation/ turnover, SP-beta prophage

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21350

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: hydrolyzes the peptidoglycan and cell wall of B. subtilis PubMed
  • Protein family: FPP/GGPP synthetase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: contains soluble lytic transglycosylase (SLT) and peptidase M23 domains PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed