Difference between revisions of "NrnB"
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| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yngD_1948313_1949512_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:nrnB_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yngD_1948313_1949512_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:nrnB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU18200]] |
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Revision as of 13:30, 16 May 2013
- Description: oligoribonuclease (nano-RNase)
| Gene name | nrnB |
| Synonyms | yngD |
| Essential | no |
| Product | nano-RNase B |
| Function | degradation of RNA oligonucleotides |
| Gene expression levels in SubtiExpress: nrnB | |
| MW, pI | 46 kDa, 5.026 |
| Gene length, protein length | 1197 bp, 399 aa |
| Immediate neighbours | yngC, yngE |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18200
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: degradation of RNA oligonucleotides PubMed
- Protein family: DHH/DHHA1 protein family of phosphoesterases PubMed
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31824
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ming Fang, Wencke-Maria Zeisberg, Ciaran Condon, Vasily Ogryzko, Antoine Danchin, Undine Mechold
Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis.
Nucleic Acids Res: 2009, 37(15);5114-25
[PubMed:19553197]
[WorldCat.org]
[DOI]
(I p)
