Difference between revisions of "NagB"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nagA]]'', ''[[nagR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nagA]]'', ''[[nagR]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35020 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35020 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:nagB_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:nagB_context.gif]] |
Revision as of 11:22, 14 May 2013
- Description: glucosamine-6-phosphate deaminase
Gene name | nagB |
Synonyms | |
Essential | no |
Product | glucosamine-6-phosphate deaminase |
Function | N-acetylglucosamine utilization |
Gene expression levels in SubtiExpress: nagB | |
Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism, Murein recycling | |
MW, pI | 26 kDa, 5.717 |
Gene length, protein length | 726 bp, 242 aa |
Immediate neighbours | nagA, nagR |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall degradation/ turnover, utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35020
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
- A mutation was found in this gene after evolution under relaxed selection for sporulation PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 (according to Swiss-Prot)
- Protein family: NagB subfamily (according to Swiss-Prot)
- Paralogous protein(s): GamA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: O35000
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed