Difference between revisions of "GbsB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yuaD]]'', ''[[gbsA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yuaD]]'', ''[[gbsA]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31050 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31050 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31050 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31050 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31050 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31050 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:gbsB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gbsB_context.gif]]

Revision as of 11:06, 14 May 2013

  • Description: choline dehydrogenase (FAD-dependent), glycine betaine synthesis

Gene name gbsB
Synonyms
Essential no
Product choline dehydrogenase (FAD-dependent)
Function osmoprotection
Gene expression levels in SubtiExpress: gbsB
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 43 kDa, 4.912
Gene length, protein length 1209 bp, 403 aa
Immediate neighbours yuaD, gbsA
Sequences Protein DNA DNA_with_flanks
Genetic context
GbsB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GbsB expression.png




























Categories containing this gene/protein

miscellaneous metabolic pathways, coping with hyper-osmotic stress

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU31050

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: An alcohol + NAD+ = an aldehyde or ketone + NADH (according to Swiss-Prot)
  • Protein family: iron-containing alcohol dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Erhard Bremer, University of Marburg, Germany homepage

Your additional remarks

References

Additional publications: PubMed