Difference between revisions of "YqiB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqiC]]'', ''[[folD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqiC]]'', ''[[folD]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24300 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24300 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24300 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24300 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24300 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24300 DNA_with_flanks]
 
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Revision as of 10:41, 14 May 2013

  • Description: similar to exodeoxyribonuclease VII (large subunit)

Gene name yqiB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yqiB
Interactions involving this protein in SubtInteract: YqiB
MW, pI 50 kDa, 9.546
Gene length, protein length 1344 bp, 448 aa
Immediate neighbours yqiC, folD
Sequences Protein DNA DNA_with_flanks
Genetic context
YqiB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqiB expression.png
























Categories containing this gene/protein

genetics/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU24300

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates (according to Swiss-Prot)
  • Protein family: xseA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537] [WorldCat.org] [DOI] (P p)

Additional publications: PubMed