Difference between revisions of "HtpX"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykrK]]'', ''[[ktrD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykrK]]'', ''[[ktrD]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13490 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13490 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13490 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13490 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13490 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13490 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ykrL_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ykrL_context.gif]]

Revision as of 10:02, 14 May 2013

  • Description: stress-responsive membrane protease

Gene name htpX
Synonyms ykrL
Essential no
Product membrane protease
Function quality control of membrane proteins
Gene expression levels in SubtiExpress: htpX
MW, pI 32 kDa, 10.157
Gene length, protein length 894 bp, 298 aa
Immediate neighbours ykrK, ktrD
Sequences Protein DNA DNA_with_flanks
Genetic context
YkrL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkrL expression.png















Categories containing this gene/protein

membrane proteins, proteolysis

This gene is a member of the following regulons

Rok regulon, YkrK regulon,

The gene

Basic information

  • Locus tag: BSU13490

Phenotypes of a mutant

  • increased sensitivity to membrane protein overproduction PubMed
  • increased sensitivity to dissipation of the membrane potential by the addition of valinomycin PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase M48B family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • induced by membrane protein overproduction (YkrK) PubMed
    • induced by dissipation of membrane potential (ΔΨ) by addition of a sublethal concentration of valinomycin PubMed
    • expression is increased due to mutations in resE, resB, sdhC, and sdhA PubMed
    • induced by salt stress PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References