Difference between revisions of "DinB"

From SubtiWiki
Jump to: navigation, search
Line 21: Line 21:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydgF]]'', ''[[ydgG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydgF]]'', ''[[ydgG]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU05630 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU05630 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU05630 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU05630 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU05630 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU05630 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dinB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dinB_context.gif]]

Revision as of 09:34, 14 May 2013

  • Description: nuclease inhibitor

Gene name dinB
Synonyms
Essential no
Product nuclease inhibitor
Function response to DNA damage
Gene expression levels in SubtiExpress: dinB
MW, pI 19 kDa, 5.614
Gene length, protein length 516 bp, 172 aa
Immediate neighbours ydgF, ydgG
Sequences Protein DNA DNA_with_flanks
Genetic context
DinB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
DinB expression.png
























Categories containing this gene/protein

DNA repair/ recombination

This gene is a member of the following regulons

LexA regulon

The gene

Basic information

  • Locus tag: BSU05630

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: dinB family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulatory mechanism:
  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References