Difference between revisions of "QdoI"
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to plant product quercetin | |style="background:#ABCDEF;" align="center"|'''Function''' || resistance to plant product quercetin | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU39980 qdoI] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37,4 kDa, 5.562 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37,4 kDa, 5.562 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxaH]]'', ''[[qdoR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxaH]]'', ''[[qdoR]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39980 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yxaG_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yxaG_context.gif]] | ||
Revision as of 14:17, 13 May 2013
- Description: Fe-containing quercetin 2,3-dioxygenase
| Gene name | qdoI |
| Synonyms | yxaG |
| Essential | no |
| Product | Fe-containing quercetin 2,3-dioxygenase |
| Function | resistance to plant product quercetin |
| Gene expression levels in SubtiExpress: qdoI | |
| MW, pI | 37,4 kDa, 5.562 |
| Gene length, protein length | 1011 bp, 337 aa |
| Immediate neighbours | yxaH, qdoR |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU39980
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: oxidation of the flavonol quercetin with dioxygen, cleaving the central heterocyclic ring and releasing CO
- Protein family:bicupin family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): Mn(II) (preferred), but also active with Fe(II) snd Co(II) PubMed
- Effectors of protein activity:
Database entries
- Structure: 2H0V
- UniProt: P42106
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
J B Broderick
Catechol dioxygenases.
Essays Biochem: 1999, 34;173-89
[PubMed:10730195]
[WorldCat.org]
[DOI]
(P p)
T D Bugg, J Sanvoisin, E L Spence
Exploring the catalytic mechanism of the extradiol catechol dioxygenases.
Biochem Soc Trans: 1997, 25(1);81-5
[PubMed:9056848]
[WorldCat.org]
[DOI]
(P p)
Original publications
