Difference between revisions of "CapE"
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|style="background:#ABCDEF;" align="center"|'''Function''' || capsule synthesis | |style="background:#ABCDEF;" align="center"|'''Function''' || capsule synthesis | ||
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− | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35870 capE] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 6 kDa, 6.487 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 6 kDa, 6.487 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pgdS]]'', ''[[capA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pgdS]]'', ''[[capA]]'' | ||
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− | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35870 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ywtC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ywtC_context.gif]] |
Revision as of 14:01, 13 May 2013
- Description: stimulates poly-gamma-glutamate production in the presence of zinc, also involved in extra-chromosomal DNA maintenance
Gene name | capE |
Synonyms | ywtC, pgsE, edmS |
Essential | no |
Product | unknown |
Function | capsule synthesis |
Gene expression levels in SubtiExpress: capE | |
MW, pI | 6 kDa, 6.487 |
Gene length, protein length | 165 bp, 55 aa |
Immediate neighbours | pgdS, capA |
Sequences | Protein DNA Advanced_DNA |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
capsule biosynthesis and degradation, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35870
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: N-terminal membrane-anchoring domain and a C-terminal assembly accelerator-like structure PubMed
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- Structure:
- UniProt: P96739
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information: The operon is not expressed in the lab strain 168 due to lack of expression of DegQ resulting in inactivity of DegS and DegU PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References