Difference between revisions of "GcvPB"

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|style="background:#ABCDEF;" align="center"|'''Function''' || glycine utilization  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || glycine utilization  
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU24550 gcvPB]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24550 gcvPB]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 54 kDa, 5.283   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 54 kDa, 5.283   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqhL]]'', ''[[gcvPA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqhL]]'', ''[[gcvPA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14386&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24550 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24550 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24550 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:gcvPB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gcvPB_context.gif]]

Revision as of 13:16, 13 May 2013

  • Description: glycine decarboxylase (subunit 2)

Gene name gcvPB
Synonyms yqhK, gcvP
Essential no
Product glycine decarboxylase (subunit 2)
Function glycine utilization
Gene expression levels in SubtiExpress: gcvPB
MW, pI 54 kDa, 5.283
Gene length, protein length 1464 bp, 488 aa
Immediate neighbours yqhL, gcvPA
Sequences Protein DNA Advanced_DNA
Genetic context
GcvPB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GcvPB expression.png
























Categories containing this gene/protein

utilization of amino acids, membrane proteins

This gene is a member of the following regulons

Gly-box

The gene

Basic information

  • Locus tag: BSU24550

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Glycine + H-protein-lipoyllysine = H-protein-S-aminomethyldihydrolipoyllysine + CO2 (according to Swiss-Prot)
  • Protein family: C-terminal subunit subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: repressed by casamino acids PubMed , induced by glycine PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References