Difference between revisions of "YfnI"
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|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of lipoteichoic acid | |style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of lipoteichoic acid | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07260 yfnI] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 73 kDa, 5.951 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 73 kDa, 5.951 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yetO]]'', ''[[yfnH]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yetO]]'', ''[[yfnH]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07260 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07260 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07260 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yfnI_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yfnI_context.gif]] | ||
Revision as of 12:20, 13 May 2013
- Description: polyglycerolphosphate lipoteichoic acid synthase, general stress protein, major secreted protein, required for survival at low temperature (4°C)
| Gene name | yfnI |
| Synonyms | yetP, ltaSA |
| Essential | no |
| Product | minor lipoteichoic acid synthetase |
| Function | biosynthesis of lipoteichoic acid |
| Gene expression levels in SubtiExpress: yfnI | |
| MW, pI | 73 kDa, 5.951 |
| Gene length, protein length | 1917 bp, 639 aa |
| Immediate neighbours | yetO, yfnH |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
cell wall synthesis, biosynthesis of cell wall components, cell envelope stress proteins (controlled by SigM, V, W, X, Y), phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU07260
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LTA synthase family (according to Swiss-Prot)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylation on (Thr-311 OR Ser-312) PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- extracellular (signal peptide) PubMed
Database entries
- Structure:
- UniProt: Q797B3
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yfnI (according to DBTBS)
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- SM-NB (yfnI-spc), available in Anne Galinier's and Boris Görke's labs
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Additional reviews: PubMed
Nathalie T Reichmann, Angelika Gründling
Location, synthesis and function of glycolipids and polyglycerolphosphate lipoteichoic acid in Gram-positive bacteria of the phylum Firmicutes.
FEMS Microbiol Lett: 2011, 319(2);97-105
[PubMed:21388439]
[WorldCat.org]
[DOI]
(I p)
Original publications
Additional publications: PubMed
Mirka E Wörmann, Rebecca M Corrigan, Peter J Simpson, Steve J Matthews, Angelika Gründling
Enzymatic activities and functional interdependencies of Bacillus subtilis lipoteichoic acid synthesis enzymes.
Mol Microbiol: 2011, 79(3);566-83
[PubMed:21255105]
[WorldCat.org]
[DOI]
(I p)
Kathrin Schirner, Jon Marles-Wright, Richard J Lewis, Jeff Errington
Distinct and essential morphogenic functions for wall- and lipo-teichoic acids in Bacillus subtilis.
EMBO J: 2009, 28(7);830-42
[PubMed:19229300]
[WorldCat.org]
[DOI]
(I p)
Birgit Voigt, Haike Antelmann, Dirk Albrecht, Armin Ehrenreich, Karl-Heinz Maurer, Stefan Evers, Gerhard Gottschalk, Jan Maarten van Dijl, Thomas Schweder, Michael Hecker
Cell physiology and protein secretion of Bacillus licheniformis compared to Bacillus subtilis.
J Mol Microbiol Biotechnol: 2009, 16(1-2);53-68
[PubMed:18957862]
[WorldCat.org]
[DOI]
(I p)
Adrian J Jervis, Penny D Thackray, Chris W Houston, Malcolm J Horsburgh, Anne Moir
SigM-responsive genes of Bacillus subtilis and their promoters.
J Bacteriol: 2007, 189(12);4534-8
[PubMed:17434969]
[WorldCat.org]
[DOI]
(P p)
Boris Macek, Ivan Mijakovic, Jesper V Olsen, Florian Gnad, Chanchal Kumar, Peter R Jensen, Matthias Mann
The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis.
Mol Cell Proteomics: 2007, 6(4);697-707
[PubMed:17218307]
[WorldCat.org]
[DOI]
(P p)
