Difference between revisions of "YcsF"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU04050 ycsF]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04050 ycsF]
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay]'''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycsE]]'', ''[[ycsG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycsE]]'', ''[[ycsG]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12213&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04050 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04050 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04050 Advanced_DNA]
 
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Revision as of 12:09, 13 May 2013

  • Description: similar to lactam utilization protein

Gene name ycsF
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ycsF
Function and regulation of this protein in SubtiPathways:
Phosphorelay
MW, pI 27 kDa, 5.582
Gene length, protein length 771 bp, 257 aa
Immediate neighbours ycsE, ycsG
Sequences Protein DNA Advanced_DNA
Genetic context
YcsF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YcsF expression.png




























Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

KipR regulon, TnrA regulon

The gene

Basic information

  • Locus tag: BSU04050

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0271 (lamB) family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

L Wang, R Grau, M Perego, J A Hoch
A novel histidine kinase inhibitor regulating development in Bacillus subtilis.
Genes Dev: 1997, 11(19);2569-79
[PubMed:9334321] [WorldCat.org] [DOI] (P p)