Difference between revisions of "PhoD"
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|style="background:#ABCDEF;" align="center"|'''Function''' || aquisition of phosphate upon phosphoate starvation | |style="background:#ABCDEF;" align="center"|'''Function''' || aquisition of phosphate upon phosphoate starvation | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02620 phoD] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/PhoD PhoD] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/PhoD PhoD] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yczK]]'', ''[[tatAD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yczK]]'', ''[[tatAD]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02620 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02620 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02620 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:phoD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:phoD_context.gif]] | ||
Revision as of 12:04, 13 May 2013
- Description: phosphodiesterase/alkaline phosphatase
| Gene name | phoD |
| Synonyms | ycbS |
| Essential | no |
| Product | phosphodiesterase/alkaline phosphatase |
| Function | aquisition of phosphate upon phosphoate starvation |
| Gene expression levels in SubtiExpress: phoD | |
| Interactions involving this protein in SubtInteract: PhoD | |
| Metabolic function and regulation of this protein in SubtiPathways: Protein secretion | |
| MW, pI | 62 kDa, 8.394 |
| Gene length, protein length | 1668 bp, 556 aa |
| Immediate neighbours | yczK, tatAD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02620
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: A phosphate monoester + H2O = an alcohol + phosphate (according to Swiss-Prot)
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: extracellular (signal peptide) PubMed, secreted by the TatAD-TatCD complex PubMed
Database entries
- Structure: 2YEQ
- UniProt: P42251
- KEGG entry: [3]
- E.C. number: 3.1.3.1
Additional information
Expression and regulation
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Oscar Kuipers, University of Groningen, The Netherlands Homepage
Your additional remarks
References
Additional publications: PubMed
