Difference between revisions of "YbfJ"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02250 ybfJ]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02250 ybfJ]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 5.639   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 5.639   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mpr]]'', ''[[ybfK]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mpr]]'', ''[[ybfK]]''
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12019&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02250 Advanced_DNA]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ybfJ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ybfJ_context.gif]]

Revision as of 12:02, 13 May 2013

  • Description: unknown

Gene name ybfJ
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ybfJ
MW, pI 14 kDa, 5.639
Gene length, protein length 396 bp, 132 aa
Immediate neighbours mpr, ybfK
Sequences Protein DNA Advanced_DNA
Genetic context
YbfJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YbfJ expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02250

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed by casamino acids PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)