Difference between revisions of "YxxG"

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* '''Description:''' unknown <br/><br/>
+
* '''Description:''' immunity protein, protects the cell against the toxic activity of [[WapA]] <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|''yxxG''
 
|''yxxG''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''wapI ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
+
|style="background:#ABCDEF;" align="center"| '''Product''' || immunity protein
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
+
|style="background:#ABCDEF;" align="center"|'''Function''' || intercellular competition
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU39220 yxxG]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU39220 yxxG]
 +
|-
 +
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YxxG YxxG]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 4.424   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 4.424   
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<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
 
= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
 +
{{SubtiWiki category|[[toxins, antitoxins and immunity against toxins]]}},
 
{{SubtiWiki category|[[phosphoproteins]]}},
 
{{SubtiWiki category|[[phosphoproteins]]}},
{{SubtiWiki category|[[proteins of unknown function]]}}
 
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
Line 57: Line 55:
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 
* severe growth defect  {{PubMed|20815827}}
 
* severe growth defect  {{PubMed|20815827}}
 +
 
=== Database entries ===
 
=== Database entries ===
  
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
 +
** [[YxxG]] inhibits the toxic activity of [[WapA]] {{PubMed|23572593}}
  
 
* '''Protein family:'''
 
* '''Protein family:'''
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* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
 +
** [[WapA]]-[[YxxG]] {{PubMed|23572593}}
  
* '''[[Localization]]:'''
+
* '''[[Localization]]:'''  
  
 
=== Database entries ===
 
=== Database entries ===
Line 143: Line 144:
 
=References=
 
=References=
  
<pubmed>16672620, 20815827,17218307,16306698 9537385 </pubmed>
+
<pubmed>16672620, 20815827,17218307,16306698 9537385 23572593</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:49, 19 April 2013

  • Description: immunity protein, protects the cell against the toxic activity of WapA

Gene name yxxG
Synonyms wapI
Essential no
Product immunity protein
Function intercellular competition
Gene expression levels in SubtiExpress: yxxG
Interactions involving this protein in SubtInteract: YxxG
MW, pI 16 kDa, 4.424
Gene length, protein length 426 bp, 142 aa
Immediate neighbours yxiF, wapA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YxxG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxxG expression.png















Categories containing this gene/protein

toxins, antitoxins and immunity against toxins, phosphoproteins,

This gene is a member of the following regulons

DegU regulon, YvrHb regulon

The gene

Basic information

  • Locus tag: BSU39220

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation on (Tyr-102 OR Ser-105) PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed at high salt concentration (DegU-P) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References