Difference between revisions of "YaaH"
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| − | * '''Description:''' general stress protein, survival of ethanol stress, [[SafA]]-dependent spore coat protein <br/><br/> | + | * '''Description:''' general stress protein, survival of ethanol stress, [[SafA]]-dependent spore coat protein, spore cortex lytic protein <br/><br/> |
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|''yaaH'' | |''yaaH'' | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' sleL'' |
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || N-acetylglucosaminidase |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress, protection of the spore | |style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress, protection of the spore | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yaaH_23868_25151_-1 yaaH] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yaaH_23868_25151_-1 yaaH] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigE]] {{PubMed|15699190,10419957}}, [[SigB]] {{PubMed|15805528}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,10419957}}, [[SigB]] {{PubMed|15805528}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
| − | <pubmed>19087206,12884008,10419957,15805528 11964120, 19933362 22171814 15383836 </pubmed> | + | <pubmed>19087206,12884008,10419957,15805528 11964120, 19933362 22171814 15383836 22343356 18835992 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:13, 2 April 2013
- Description: general stress protein, survival of ethanol stress, SafA-dependent spore coat protein, spore cortex lytic protein
| Gene name | yaaH |
| Synonyms | sleL |
| Essential | no |
| Product | N-acetylglucosaminidase |
| Function | survival of ethanol stress, protection of the spore |
| Gene expression levels in SubtiExpress: yaaH | |
| MW, pI | 48 kDa, 5.618 |
| Gene length, protein length | 1281 bp, 427 aa |
| Immediate neighbours | dgk, yaaI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
sporulation proteins, general stress proteins (controlled by SigB)
This gene is a member of the following regulons
SigB regulon, SigE regulon, SpoIIID regulon
The gene
Basic information
- Locus tag: BSU00160
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- inner spore coat PubMed
Database entries
- Structure:
- UniProt: P37531
- KEGG entry: [3]
- E.C. number:
Additional information
required for survival of ethanol stress PubMed
Expression and regulation
- Operon: yaaH PubMed
- Regulation:
- Additional information: the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
