Difference between revisions of "YodC"

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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yodC_2127813_2128421_1 yodC] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yodC_2127813_2128421_1 yodC] {{PubMed|22383849}}
  
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* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 21:17, 15 March 2013

  • Description: similar to nitroreductase

Gene name yodC
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yodC
MW, pI 22 kDa, 5.274
Gene length, protein length 606 bp, 202 aa
Immediate neighbours yodB, mhqD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YodC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YodC expression.png















Categories containing this gene/protein

electron transport/ other, resistance against oxidative and electrophile stress

This gene is a member of the following regulons

YodB regulon

The gene

Basic information

  • Locus tag: BSU19550

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: type A lantibiotic family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
    • induced by thiol-reactive compounds (catechol, menaquinone) (YodB) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References