Difference between revisions of "OpuAC"

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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
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* '''Operon:''' ''[[opuAA]]-[[opuAB]]-[[opuAC]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuAC_323119_324000_1 opuAC] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuAC_323119_324000_1 opuAC] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:''' [[SigA]]  {{PubMed|23175650}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** induced by osmotic stress {{PubMed|23175650}}
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** repressed by intracellular glycine betaine {{PubMed|23175650}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
  
<pubmed>10092453,9335265,16645306,16225868,16445940,7622480,18567662, 21296969 </pubmed>
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<pubmed>10092453,9335265,16645306,16225868,16445940,7622480,18567662, 21296969 22383849 23175650</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:25, 26 November 2012

Gene name opuAC
Synonyms
Essential no
Product glycine betaine ABC transporter (binding protein)
Function compatible solute transport
Gene expression levels in SubtiExpress: opuAC
Interactions involving this protein in SubtInteract: OpuAC
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 32 kDa, 8.015
Gene length, protein length 879 bp, 293 aa
Immediate neighbours opuAB, amhX
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
OpuAC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
OpuAC expression.png















Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU03000

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2B4L (complex with glycine betaine), 3CHG (in complex with DMSA)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced by osmotic stress PubMed
    • repressed by intracellular glycine betaine PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Erhard Bremer, University of Marburg, Germany homepage

Your additional remarks

References