Difference between revisions of "RpmB"

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* '''Regulation:'''  
 
* '''Regulation:'''  
 
** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}}
 
** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}}
 +
** strongly repressed in response to glucose starvation in M9 medium {{PubMed|23033921}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
Line 136: Line 137:
  
 
=References=
 
=References=
'''Additional publications:''' {{PubMed|23002217}}
+
'''Additional publications:''' {{PubMed|23002217,23033921}}
 
<pubmed>19653700 </pubmed>
 
<pubmed>19653700 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:35, 8 October 2012

Gene name rpmB
Synonyms yloT
Essential no PubMed
Product ribosomal protein L28
Function translation
Gene expression levels in SubtiExpress: rpmB
Interactions involving this protein in SubtInteract: RpmB
MW, pI 6 kDa, 12.242
Gene length, protein length 186 bp, 62 aa
Immediate neighbours spoVM, yloU
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RpmB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpmB expression.png















Categories containing this gene/protein

translation

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU15820

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • strongly repressed in response to glucose starvation in M9 medium PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Matthew A Lauber, William E Running, James P Reilly
B. subtilis ribosomal proteins: structural homology and post-translational modifications.
J Proteome Res: 2009, 8(9);4193-206
[PubMed:19653700] [WorldCat.org] [DOI] (P p)