Difference between revisions of "SbcD"
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| − | * '''Operon:''' ''[[sbcD]]-[[sbcC]]-[[ | + | * '''Operon:''' ''[[addB]]-[[addA]]-[[sbcD]]-[[sbcC]]-[[hlpB]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sbcD_1143577_1144752_1 sbcD] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sbcD_1143577_1144752_1 sbcD] {{PubMed|22383849}} | ||
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=References= | =References= | ||
| − | <pubmed>8493111,11948146 , 16479537</pubmed> | + | <pubmed>8493111,11948146 22383849, 16479537</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:33, 21 September 2012
- Description: exonuclease SbcD homolog
| Gene name | sbcD |
| Synonyms | yixA |
| Essential | no |
| Product | exonuclease SbcD homolog |
| Function | unknown |
| Gene expression levels in SubtiExpress: sbcD | |
| MW, pI | 43 kDa, 5.003 |
| Gene length, protein length | 1173 bp, 391 aa |
| Immediate neighbours | addA, sbcC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
DNA repair/ recombination, genetic competence
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10640
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: sbcD family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: Cytoplasm (Homogeneous) PubMed
Database entries
- Structure:
- UniProt: P23479
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- GP894 (sbcCD::kan), available in Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
