Difference between revisions of "CitM"

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(References)
(Expression and regulation)
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=citM_834383_835684_1 citM] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=citM_834383_835684_1 citM] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''Sigma factor:''' [[SigA]] {{PubMed|10972810}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 
** induced by citrate ([[CitT]]) {{PubMed|10972810}}
 
** induced by citrate ([[CitT]]) {{PubMed|10972810}}
** repressed by glucose ([[CcpA]])  {{PubMed|10972810}}
+
** repressed by glucose ([[CcpA]])  {{PubMed|22900538,10972810}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 
** [[CitT]]: transcription activation {{PubMed|10972810}}
 
** [[CitT]]: transcription activation {{PubMed|10972810}}
** [[CcpA]]: transcription repression {{PubMed|10972810}}
+
** [[CcpA]]: transcription repression {{PubMed|22900538,10972810}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''

Revision as of 15:54, 21 August 2012

  • Description: Mg2+-citrate transporter

Gene name citM
Synonyms yflO
Essential no
Product Mg2+-citrate transporter
Function citrate uptake
Gene expression levels in SubtiExpress: citM
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism, Metal ion homeostasis
MW, pI 45 kDa, 6.227
Gene length, protein length 1299 bp, 433 aa
Immediate neighbours yflP, yflN
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CitM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CitM expression.png




























Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

CcpA regulon, CitT regulon

The gene

Basic information

  • Locus tag: BSU07610

Phenotypes of a mutant

no growth with citrate as sole carbon source PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: View classification (according to Swiss-Prot)
  • Paralogous protein(s): CitH

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References