|
|
| Line 1: |
Line 1: |
| − | * '''Description:''' general stress protein, survival of ethanol stress <br/><br/>
| + | mOpxYn <a href="http://ulqkkwxchwku.com/">ulqkkwxchwku</a>, [url=http://azyrxoukujac.com/]azyrxoukujac[/url], [link=http://txggkgpwmdbx.com/]txggkgpwmdbx[/link], http://lcczbnvgwxor.com/ |
| − | | |
| − | {| align="right" border="1" cellpadding="2"
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"|'''Gene name'''
| |
| − | |''ybyB''
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"| '''Essential''' || no
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || unknown
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress
| |
| − | |-
| |
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02110 ybyB]
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 9.221
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 258 bp, 86 aa
| |
| − | |-
| |
| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cypC]]'', ''[[ybeC]]''
| |
| − | |-
| |
| − | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB12005]+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
| |
| − | |-
| |
| − | |colspan="2" | '''Genetic context''' <br/> [[Image:ybyB_context.gif]]
| |
| − | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
| |
| − | |-
| |
| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybyB_230819_231079_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:ybyB_expression.png|500px]]
| |
| − | |-
| |
| − | |}
| |
| − | | |
| − | __TOC__
| |
| − | <br/><br/><br/><br/>
| |
| − | <br/><br/><br/><br/>
| |
| − | <br/><br/><br/><br/>
| |
| − | <br/><br/><br/><br/>
| |
| − | <br/><br/><br/><br/>
| |
| − | | |
| − | | |
| − | <br/><br/>
| |
| − | | |
| − | = [[Categories]] containing this gene/protein =
| |
| − | {{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}}
| |
| − | | |
| − | = This gene is a member of the following [[regulons]] =
| |
| − | {{SubtiWiki regulon|[[SigB regulon]]}}
| |
| − | | |
| − | =The gene=
| |
| − | | |
| − | === Basic information ===
| |
| − | | |
| − | * '''Locus tag:''' BSU02110
| |
| − | | |
| − | ===Phenotypes of a mutant ===
| |
| − | | |
| − | === Database entries ===
| |
| − | | |
| − | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ybyB.html]
| |
| − | | |
| − | * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12754]
| |
| − | | |
| − | === Additional information===
| |
| − | | |
| − | | |
| − | | |
| − | | |
| − | =The protein=
| |
| − | | |
| − | === Basic information/ Evolution ===
| |
| − | | |
| − | * '''Catalyzed reaction/ biological activity:'''
| |
| − | | |
| − | * '''Protein family:'''
| |
| − | | |
| − | * '''Paralogous protein(s):'''
| |
| − | | |
| − | === Extended information on the protein ===
| |
| − | | |
| − | * '''Kinetic information:'''
| |
| − | | |
| − | * '''Domains:'''
| |
| − | | |
| − | * '''Modification:'''
| |
| − | | |
| − | * '''Cofactor(s):'''
| |
| − | | |
| − | * '''Effectors of protein activity:'''
| |
| − | | |
| − | * '''[[SubtInteract|Interactions]]:'''
| |
| − | | |
| − | * '''[[Localization]]:'''
| |
| − | | |
| − | === Database entries ===
| |
| − | | |
| − | * '''Structure:'''
| |
| − | | |
| − | * '''UniProt:''' [http://www.uniprot.org/uniprot/O31441 O31441]
| |
| − | | |
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU02110]
| |
| − | | |
| − | * '''E.C. number:'''
| |
| − | | |
| − | === Additional information===
| |
| − | | |
| − | =Expression and regulation=
| |
| − | | |
| − | * '''Operon:''' ''ybyB'' (according to [http://dbtbs.hgc.jp/COG/prom/ybyB.html DBTBS])
| |
| − | | |
| − | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybyB_230819_231079_-1 ybyB] {{PubMed|22383849}}
| |
| − | | |
| − | * '''Sigma factor:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]
| |
| − | | |
| − | * '''Regulation:''' induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]
| |
| − | | |
| − | * '''Regulatory mechanism:'''
| |
| − | | |
| − | * '''Additional information:'''
| |
| − | | |
| − | =Biological materials =
| |
| − | | |
| − | * '''Mutant:'''
| |
| − | | |
| − | * '''Expression vector:'''
| |
| − |
| |
| − | * '''lacZ fusion:'''
| |
| − | | |
| − | * '''GFP fusion:'''
| |
| − | | |
| − | * '''two-hybrid system:'''
| |
| − | | |
| − | * '''Antibody:'''
| |
| − | | |
| − | =Labs working on this gene/protein=
| |
| − | | |
| − | =Your additional remarks=
| |
| − | | |
| − | =References=
| |
| − | | |
| − | <pubmed>15805528, </pubmed>
| |
| − | | |
| − | [[Category:Protein-coding genes]]
| |
