Difference between revisions of "RplO"

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|colspan="2" | '''Genetic context''' <br/> [[Image:rplO_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:rplO_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rplO_144085_144525_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:rplO_expression.png|500px]]
 
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Revision as of 13:15, 8 August 2012

Gene name rplO
Synonyms
Essential yes PubMed
Product ribosomal protein L15
Function translation
Gene expression levels in SubtiExpress: rplO
Interactions involving this protein in SubtInteract: RplO
Metabolic function and regulation of this protein in SubtiPathways:
Protein secretion
MW, pI 15 kDa, 10.791
Gene length, protein length 438 bp, 146 aa
Immediate neighbours rpmD, secY
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RplO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RplO expression.png
























Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01350

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
    • SigA two promoters, about 140bp and 200bp upstream of the start codon PubMed
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References