Difference between revisions of "YdbD"
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| − | + | * '''Description:''' general stress protein, similar to manganese-containing catalase <br/><br/> | |
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|style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress | |style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress | ||
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 4.858 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 4.858 | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:ydbD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ydbD_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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__TOC__ | __TOC__ | ||
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<br/><br/> | <br/><br/> | ||
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** ''[[ydbD]]'' | ** ''[[ydbD]]'' | ||
| − | * | + | * '''[[Sigma factor]]:''' |
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** ''ydbD'': [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | ** ''ydbD'': [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | ||
Revision as of 11:30, 7 August 2012
- Description: general stress protein, similar to manganese-containing catalase
| Gene name | ydbD |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | survival of ethanol stress |
| MW, pI | 30 kDa, 4.858 |
| Gene length, protein length | 819 bp, 273 aa |
| Immediate neighbours | ydbC, dctB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB), resistance against oxidative and electrophile stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04430
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2 H2O2 = O2 + 2 H2O (according to Swiss-Prot)
- Protein family: manganese catalase family (according to Swiss-Prot)
- Paralogous protein(s): YjqC
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P80878
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
