Difference between revisions of "YdaP"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
* '''Description:''' general stress protein, required for survival of ethanol stress <br/><br/>
+
 
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 13: Line 13:
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || utilization of glycolate and glyoxylate
 
|style="background:#ABCDEF;" align="center"|'''Function''' || utilization of glycolate and glyoxylate
 +
|-
 +
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU04340 ydaP]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 62 kDa, 5.217   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 62 kDa, 5.217   

Revision as of 15:13, 6 August 2012


Gene name ydaP
Synonyms
Essential no
Product putative glyoxalate carboligase
Function utilization of glycolate and glyoxylate
Gene expression levels in SubtiExpress: ydaP
MW, pI 62 kDa, 5.217
Gene length, protein length 1722 bp, 574 aa
Immediate neighbours mutT, ydzK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdaP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdaP expression.png
























Categories containing this gene/protein

general stress proteins (controlled by SigB), poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU04340

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant: GP457 (spc), available in Stülke lab
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References