Difference between revisions of "YycD"

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* '''Operon:''' ''[[yycD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yycD.html DBTBS])
 
* '''Operon:''' ''[[yycD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yycD.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yycD_4159005_4159205_1 yycD] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]  
  
 
* '''Regulation:'''  induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]
 
* '''Regulation:'''  induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]

Revision as of 10:28, 17 April 2012

  • Description: general stress protein, survival of ethanol stress

Gene name yycD
Synonyms
Essential no
Product unknown
Function survival of ethanol stress
MW, pI 7 kDa, 4.776
Gene length, protein length 198 bp, 66 aa
Immediate neighbours dnaC, yyzB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YycD context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU40450

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References