Difference between revisions of "TuaF"

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(Extended information on the protein)
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* '''Operon:''' ''[[tuaA]]-[[tuaB]]-[[tuaC]]-[[tuaD]]-[[tuaE]]-[[tuaF]]-[[tuaG]]-[[tuaH]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/10048024 PubMed]
 
* '''Operon:''' ''[[tuaA]]-[[tuaB]]-[[tuaC]]-[[tuaD]]-[[tuaE]]-[[tuaF]]-[[tuaG]]-[[tuaH]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/10048024 PubMed]
  
* '''[[Sigma factor]]:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/10048024 PubMed], [[SigF]] {{PubMed|16497325}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=tuaF_3651879_3652559_-1 tuaF] {{PubMed|22383849}}
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 +
* '''Sigma factor:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/10048024 PubMed], [[SigF]] {{PubMed|16497325}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 07:41, 17 April 2012

  • Description: biosynthesis of teichuronic acid

Gene name tuaF
Synonyms yvhF
Essential no
Product unknown
Function biosynthesis of teichuronic acid
MW, pI 24 kDa, 4.553
Gene length, protein length 678 bp, 226 aa
Immediate neighbours tuaG, tuaE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
TuaF context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

cell wall synthesis, biosynthesis of cell wall components, sporulation proteins, membrane proteins

This gene is a member of the following regulons

PhoP regulon, SigF regulon

The gene

Basic information

  • Locus tag: BSU35560

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the forespore (SigF) PubMed
    • expressed under conditions of phosphate limitation (PhoP) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325] [WorldCat.org] [DOI] (P p)

Maryam Lahooti, Colin R Harwood
Transcriptional analysis of the Bacillus subtilis teichuronic acid operon.
Microbiology (Reading): 1999, 145 ( Pt 12);3409-3417
[PubMed:10627039] [WorldCat.org] [DOI] (P p)

B Soldo, V Lazarevic, M Pagni, D Karamata
Teichuronic acid operon of Bacillus subtilis 168.
Mol Microbiol: 1999, 31(3);795-805
[PubMed:10048024] [WorldCat.org] [DOI] (P p)

Wei Liu, F Marion Hulett
Comparison of PhoP binding to the tuaA promoter with PhoP binding to other Pho-regulon promoters establishes a Bacillus subtilis Pho core binding site.
Microbiology (Reading): 1998, 144 ( Pt 5);1443-1450
[PubMed:9611818] [WorldCat.org] [DOI] (P p)