Difference between revisions of "SodF"
m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk) |
|||
Line 100: | Line 100: | ||
* '''Operon:''' ''[[sqhC]]-[[sodF]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] | * '''Operon:''' ''[[sqhC]]-[[sodF]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sodF_2104056_2104901_1 sodF] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' [[SigE]] {{PubMed|15699190,18436644}} | ||
* '''Regulation:''' expressed during sporulation in the mother cell [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] | * '''Regulation:''' expressed during sporulation in the mother cell [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
Revision as of 07:46, 16 April 2012
- Description: superoxide dismutase
Gene name | sodF |
Synonyms | |
Essential | no |
Product | superoxide dismutase |
Function | detoxification of oxygen radicals |
MW, pI | 33 kDa, 6.17 |
Gene length, protein length | 843 bp, 281 aa |
Immediate neighbours | sqhC, yocR |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
sporulation proteins, resistance against oxidative and electrophile stress, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU19330
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2 superoxide + 2 H+ = O2 + H2O2 (according to Swiss-Prot)
- Protein family: terpene cyclase/mutase family (according to Swiss-Prot)
- Paralogous protein(s): SodA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): contains an iron-sulfur cluster
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O35023
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation: expressed during sporulation in the mother cell PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
T Bosak, R M Losick, A Pearson
A polycyclic terpenoid that alleviates oxidative stress.
Proc Natl Acad Sci U S A: 2008, 105(18);6725-9
[PubMed:18436644]
[WorldCat.org]
[DOI]
(I p)