Difference between revisions of "SigL"
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=== Basic information === | === Basic information === | ||
| − | * '''Coordinates:''' | + | * '''Coordinates:''' 3511532 - 3512839 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
Revision as of 11:25, 13 January 2009
- Description: The sigma-54 and RNA polymerase serve as the receptor for receipt of the melting signal from the remotely bound activator protein levR for the expression of the levanase operon. It is important for the survival in a cold environment
| Gene name | sigL |
| Synonyms | |
| Essential | no |
| Product | RNA polymerase sigma-54 factor (sigma-L) |
| Function | involved in utilization of arginine and ornithine and transport of fructose |
| MW, pI | 49,5 kDa, 7.79 |
| Gene length, protein length | 1308 bp, 436 amino acids |
| Immediate neighbours | yvfG, yvfH |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
| |
Contents
The gene
Basic information
- Coordinates: 3511532 - 3512839
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: sigma-54 factor family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- DNA binding domain (H-T-H motif) (324–343)
- pron box domain (413–421)
- 3 x Compositional bias domain (6–21),(32–53),(112–136)
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- Structure:
- Swiss prot entry: [3]
- KEGG entry: [4]
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
Labs working on this gene/protein
Michel Debarbouille, Pasteur Institute, Paris, France Homepage
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
