Difference between revisions of "RplI"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 447 bp, 149 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 447 bp, 149 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yycA]]'', ''[[yybT]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yycA]]'', ''[[gdpP]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB16087&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB16087&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
Line 101: Line 101:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[yybS]]-[[yybT]]-[[rplI]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yybST-rplI.html DBTBS])
+
* '''Operon:''' ''[[yybS]]-[[gdpP]]-[[rplI]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yybST-rplI.html DBTBS])
  
 
* '''Sigma factor:'''  
 
* '''Sigma factor:'''  

Revision as of 17:31, 9 January 2012

Gene name rplI
Synonyms
Essential yes PubMed
Product ribosomal protein L9
Function translation
Interactions involving this protein in SubtInteract: RplI
MW, pI 16 kDa, 9.964
Gene length, protein length 447 bp, 149 aa
Immediate neighbours yycA, gdpP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RplI context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU40500

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2HBB (N-terminal domain, Geobacillus stearothermophilus), 1DIV (Geobacillus stearothermophilus)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References