Difference between revisions of "YodB"
Line 1: | Line 1: | ||
− | * '''Description:''' | + | * '''Description:''' MarR/DUF24-family transcription repressor of ''[[azoR1]]'', ''[[catD]]-[[catE]]'' and ''[[yodC]]'' expression <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
− | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || MarR/DUF24-family transcription repressor |
|- | |- | ||
− | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of quinone detoxification | + | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of quinone and diamide detoxification |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 12 kDa, 4.737 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 12 kDa, 4.737 | ||
Line 75: | Line 75: | ||
* '''Domains:''' | * '''Domains:''' | ||
− | * '''Modification:''' | + | * '''Modification:''' redox-controlled by intersubunit disulfide formation of Cys6 and Cys101' in response to quinones and diamide |
* '''Cofactor(s):''' | * '''Cofactor(s):''' |
Revision as of 15:44, 15 December 2011
Gene name | yodB |
Synonyms | |
Essential | no |
Product | MarR/DUF24-family transcription repressor |
Function | regulation of quinone and diamide detoxification |
MW, pI | 12 kDa, 4.737 |
Gene length, protein length | 336 bp, 112 aa |
Immediate neighbours | yodA, yodC |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
transcription factors and their control, resistance against oxidative and electrophile stress
This gene is a member of the following regulons
The YodB regulon:
The gene
Basic information
- Locus tag: BSU19540
Phenotypes of a mutant
increased resistance to catechol and quinones PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: SunT subfamily (according to Swiss-Prot)
- Paralogous protein(s): CatR
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: redox-controlled by intersubunit disulfide formation of Cys6 and Cys101' in response to quinones and diamide
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O34844
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- subject to autorepression PubMed
- Regulatory mechanism:
- YodB: transcription repression PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original Publications