Difference between revisions of "PutP"
(→Extended information on the protein) |
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=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' uptake of proline coupled to the uptake of sodium ions |
| − | * '''Protein family:''' | + | * '''Protein family:''' sodium solute symporter family (SSS; TC2A.21) |
* '''Paralogous protein(s):''' [[OpuE]] | * '''Paralogous protein(s):''' [[OpuE]] | ||
| Line 98: | Line 98: | ||
* '''Operon:''' | * '''Operon:''' | ||
| − | ** ''[[putB]]-[[putC]]-[[putP]]'' {{PubMed|21840319}} | + | ** ''[[putB]]-[[putC]]-[[putP]]'' {{PubMed|21840319,22139509}} |
** ''[[putP]]'' (internal promoter) {{PubMed|21840319}} | ** ''[[putP]]'' (internal promoter) {{PubMed|21840319}} | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| − | ** ''[[putB]]'': [[SigA]] {{PubMed|21840319,21964733}} | + | ** ''[[putB]]'': [[SigA]] {{PubMed|21840319,21964733,22139509}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** induced in the presence of proline ([[PutR]]) {{PubMed|21840319}} | + | ** induced in the presence of proline ([[PutR]]) {{PubMed|21840319,22139509}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** [[PutR]]: transcription activation {{PubMed|21840319,21964733}} | + | ** [[PutR]]: transcription activation {{PubMed|21840319,21964733,22139509}} |
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 131: | Line 131: | ||
=References= | =References= | ||
| − | '''Additional publications:''' {{PubMed|21964733}} | + | '''Additional publications:''' {{PubMed|21964733,22139509}} |
<pubmed> 21840319 </pubmed> | <pubmed> 21840319 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 12:22, 9 December 2011
- Description: high affinity proline permease
| Gene name | putP |
| Synonyms | ycgO |
| Essential | no |
| Product | high affinity proline permease |
| Function | proline uptake |
| MW, pI | 48 kDa, 8.619 |
| Gene length, protein length | 1347 bp, 449 aa |
| Immediate neighbours | putC, putR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
transporters/ other, biosynthesis/ acquisition of amino acids, utilization of amino acids membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03220
Phenotypes of a mutant
- no growth with proline as single source of carbon or nitrogen PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: uptake of proline coupled to the uptake of sodium ions
- Protein family: sodium solute symporter family (SSS; TC2A.21)
- Paralogous protein(s): OpuE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P94392
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
