Difference between revisions of "WprA"
(→Extended information on the protein) |
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* '''Additional information:''' | * '''Additional information:''' | ||
** An [[ncRNA|antisense RNA]] is predicted for''[[wprA]]'' {{PubMed|20525796}} | ** An [[ncRNA|antisense RNA]] is predicted for''[[wprA]]'' {{PubMed|20525796}} | ||
+ | ** the amount of the mRNA is substantially decreased upon depletion of [[Rny|RNase Y]] {{PubMed|21815947}} | ||
=Biological materials = | =Biological materials = | ||
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=References= | =References= | ||
− | + | <big>''Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J'' </big> | |
+ | <big>'''RNA processing in ''Bacillus subtilis'': identification of targets of the essential RNase Y.''' </big> | ||
+ | <big>Mol Microbiol. 2011 81(6): 1459-1473. </big> | ||
+ | [http://www.ncbi.nlm.nih.gov/pubmed/21815947 PubMed:21815947] | ||
<pubmed>10075409,11987133,9004506,20525796,18957862 18763711 16306698, 9687444 12028417 </pubmed> | <pubmed>10075409,11987133,9004506,20525796,18957862 18763711 16306698, 9687444 12028417 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 14:35, 20 November 2011
- Description: cell wall-associated protein precursor
Gene name | wprA |
Synonyms | yisM |
Essential | no |
Product | cell wall-associated protein precursor |
Function | unknown |
MW, pI | 96 kDa, 9.58 |
Gene length, protein length | 2682 bp, 894 aa |
Immediate neighbours | yisL, yisN |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10770
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: peptidase S8 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: secreted (according to Swiss-Prot), extracellular (signal peptide) PubMed, membrane PubMed
Database entries
- Structure:
- UniProt: P54423
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
- An antisense RNA is predicted forwprA PubMed
- the amount of the mRNA is substantially decreased upon depletion of RNase Y PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. Mol Microbiol. 2011 81(6): 1459-1473. PubMed:21815947