Difference between revisions of "SigW regulon"
(→Genes in this regulon) |
(→Genes in this regulon) |
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| Line 9: | Line 9: | ||
* ''[[divIC]]'' | * ''[[divIC]]'' | ||
* ''[[fabF]]'' | * ''[[fabF]]'' | ||
| + | * ''[[fatR]]'' | ||
* ''[[floT]]'' | * ''[[floT]]'' | ||
* ''[[fosB]]'' | * ''[[fosB]]'' | ||
* ''[[pbpE]]'' | * ''[[pbpE]]'' | ||
| − | |||
* ''[[pspA]]'' | * ''[[pspA]]'' | ||
* ''[[racX]]'' | * ''[[racX]]'' | ||
* ''[[rsiW]]'' | * ''[[rsiW]]'' | ||
* ''[[sigW]]'' | * ''[[sigW]]'' | ||
| + | * ''[[spo0A]]'' | ||
* ''[[sppA]]'' | * ''[[sppA]]'' | ||
* ''[[spx]]'' | * ''[[spx]]'' | ||
| Line 23: | Line 24: | ||
* ''[[yabR]]'' | * ''[[yabR]]'' | ||
* ''[[ybfO]]'' | * ''[[ybfO]]'' | ||
| + | * ''[[ybfP]]'' | ||
| + | * ''[[ybfQ]]'' | ||
* ''[[yceC]]'' | * ''[[yceC]]'' | ||
* ''[[yceD]]'' | * ''[[yceD]]'' | ||
| Line 31: | Line 34: | ||
* ''[[ydbS]]'' | * ''[[ydbS]]'' | ||
* ''[[ydbT]]'' | * ''[[ydbT]]'' | ||
| − | |||
| − | |||
| − | |||
* ''[[ydjO]]'' | * ''[[ydjO]]'' | ||
* ''[[ydjP]]'' | * ''[[ydjP]]'' | ||
| Line 55: | Line 55: | ||
* ''[[yqjL]]'' | * ''[[yqjL]]'' | ||
* ''[[yrhH]]'' | * ''[[yrhH]]'' | ||
| + | * ''[[yrhJ]]'' | ||
* ''[[ysdB]]'' | * ''[[ysdB]]'' | ||
* ''[[yteJ]]'' | * ''[[yteJ]]'' | ||
| Line 67: | Line 68: | ||
* ''[[ywaC]]'' | * ''[[ywaC]]'' | ||
* ''[[ywbN]]'' | * ''[[ywbN]]'' | ||
| + | * ''[[ywbO]]'' | ||
* ''[[ywnJ]]'' | * ''[[ywnJ]]'' | ||
* ''[[ywrE]]'' | * ''[[ywrE]]'' | ||
Revision as of 08:45, 16 May 2011
| Regulator | |
- The SigW regulon is induced by alkaline shock and by polymyxin B, vancomycin, cephalosporin C, D-cycloserine, and triton X-100.
Genes in this regulon
- bcrC
- divIC
- fabF
- fatR
- floT
- fosB
- pbpE
- pspA
- racX
- rsiW
- sigW
- spo0A
- sppA
- spx
- xpaC
- yaaN
- yabR
- ybfO
- ybfP
- ybfQ
- yceC
- yceD
- yceE
- yceF
- yceG
- yceH
- ydbS
- ydbT
- ydjO
- ydjP
- yeaA
- yfhK
- yfhL
- yfhM
- yjbC
- yjoB
- yknW
- yknX
- yknY
- yknZ
- yoaF
- yoaG
- yobJ
- yozO
- yqeZ
- yqfA
- yqfB
- yqjL
- yrhH
- yrhJ
- ysdB
- yteJ
- ythP
- ythQ
- yuaF
- yuaI
- yvlA
- yvlB
- yvlC
- yvlD
- ywaC
- ywbN
- ywbO
- ywnJ
- ywrE
- yxjI
- yxzE
Important publications on the SigW regulon
Thorsten Mascher, Anna-Barbara Hachmann, John D Helmann
Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors.
J Bacteriol: 2007, 189(19);6919-27
[PubMed:17675383]
[WorldCat.org]
[DOI]
(P p)
Bronwyn G Butcher, John D Helmann
Identification of Bacillus subtilis sigma-dependent genes that provide intrinsic resistance to antimicrobial compounds produced by Bacilli.
Mol Microbiol: 2006, 60(3);765-82
[PubMed:16629676]
[WorldCat.org]
[DOI]
(P p)
Min Cao, Phil A Kobel, Maud M Morshedi, Ming Fang Winston Wu, Chris Paddon, John D Helmann
Defining the Bacillus subtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches.
J Mol Biol: 2002, 316(3);443-57
[PubMed:11866510]
[WorldCat.org]
[DOI]
(P p)
M S Turner, J D Helmann
Mutations in multidrug efflux homologs, sugar isomerases, and antimicrobial biosynthesis genes differentially elevate activity of the sigma(X) and sigma(W) factors in Bacillus subtilis.
J Bacteriol: 2000, 182(18);5202-10
[PubMed:10960106]
[WorldCat.org]
[DOI]
(P p)
X Huang, A Gaballa, M Cao, J D Helmann
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W.
Mol Microbiol: 1999, 31(1);361-71
[PubMed:9987136]
[WorldCat.org]
[DOI]
(P p)
X Huang, K L Fredrick, J D Helmann
Promoter recognition by Bacillus subtilis sigmaW: autoregulation and partial overlap with the sigmaX regulon.
J Bacteriol: 1998, 180(15);3765-70
[PubMed:9683469]
[WorldCat.org]
[DOI]
(P p)
