Difference between revisions of "KamA"
| Line 32: | Line 32: | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| + | {{SubtiWiki category|[[sporulation proteins]]}}, | ||
{{SubtiWiki category|[[poorly characterized/ putative enzymes]]}} | {{SubtiWiki category|[[poorly characterized/ putative enzymes]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| + | {{SubtiWiki regulon|[[SigE regulon]]}} | ||
| Line 95: | Line 97: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[yodT]]-[[yodS]]-[[yodR]]-[[yodQ]]-[[yodP]]-[[kamA]]-[[yokU]]'' {{PubMed|14523133}} | ||
| − | * ''' | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|14523133}} |
| − | + | * '''Regulation:''' expressed early during sporuation in the mother cell ([[SigE]]) {{PubMed|14523133}} | |
| − | |||
| − | * '''Regulation:''' | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 126: | Line 127: | ||
=References= | =References= | ||
'''Additional publications:''' {{PubMed|21538109}} | '''Additional publications:''' {{PubMed|21538109}} | ||
| − | <pubmed>10839984</pubmed> | + | <pubmed>10839984 14523133</pubmed> |
| − | |||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:04, 5 May 2011
- Description: lysine 2,3-aminomutase
| Gene name | kamA |
| Synonyms | yodO |
| Essential | no |
| Product | lysine 2,3-aminomutase |
| Function | unknown |
| MW, pI | 53 kDa, 6.04 |
| Gene length, protein length | 1413 bp, 471 aa |
| Immediate neighbours | yokU, yodP |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
sporulation proteins, poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU19690
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: L-lysine = beta-lysine
- Protein family: UPF0720 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O34676
- KEGG entry: [2]
- E.C. number: 5.4.3.2
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Andrea Feucht, Louise Evans, Jeff Errington
Identification of sporulation genes by genome-wide analysis of the sigmaE regulon of Bacillus subtilis.
Microbiology (Reading): 2003, 149(Pt 10);3023-3034
[PubMed:14523133]
[WorldCat.org]
[DOI]
(P p)
D Chen, F J Ruzicka, P A Frey
A novel lysine 2,3-aminomutase encoded by the yodO gene of bacillus subtilis: characterization and the observation of organic radical intermediates.
Biochem J: 2000, 348 Pt 3(Pt 3);539-49
[PubMed:10839984]
[WorldCat.org]
(P p)
