Difference between revisions of "YrhJ"

From SubtiWiki
Jump to: navigation, search
Line 12: Line 12:
 
|style="background:#ABCDEF;" align="center"| '''Product''' || NADPH-[[cytochrome P450]] reductase  
 
|style="background:#ABCDEF;" align="center"| '''Product''' || NADPH-[[cytochrome P450]] reductase  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
+
|style="background:#ABCDEF;" align="center"|'''Function''' || fatty acid metabolism
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 118 kDa, 6.017   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 118 kDa, 6.017   
Line 52: Line 52:
 
=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:''' NADPH + n oxidized hemoprotein = NADP<sup>+</sup> + n reduced hemoprotein (according to Swiss-Prot)
+
* '''Catalyzed reaction/ biological activity:'''  
 +
** hydroxylates medium-chain fatty acids in subterminal positions
  
 
* '''Protein family:'''
 
* '''Protein family:'''
  
* '''Paralogous protein(s):'''
+
* '''Paralogous protein(s):''' [[YetO]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 13:09, 11 August 2010

Gene name yrhJ
Synonyms
Essential no
Product NADPH-cytochrome P450 reductase
Function fatty acid metabolism
MW, pI 118 kDa, 6.017
Gene length, protein length 3162 bp, 1054 aa
Immediate neighbours yrhK, fatR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YrhJ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU27160

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • hydroxylates medium-chain fatty acids in subterminal positions
  • Protein family:
  • Paralogous protein(s): YetO

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • induced by unsaturated fatty acids (FatR) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References