Difference between revisions of "GerR"
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* '''Regulation:''' | * '''Regulation:''' | ||
− | ** expressed during sporulation in the mother cell ([[SigE]]) {{PubMed|15699190}} | + | ** expressed during sporulation in the mother cell ([[SigE, [[SpoIIID]]]]) {{PubMed|15699190,20435725}} |
** repressed by glucose (3.2-fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | ** repressed by glucose (3.2-fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | ||
** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | ** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
+ | ** [[SpoIIID]]: transcription activation {{PubMed|20435725}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
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=References= | =References= | ||
− | <pubmed>15383836,15621419,,12850135 12107147, </pubmed> | + | <pubmed>15383836,15621419,20435725,12850135 12107147, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 14:11, 4 May 2010
- Description: probably DNA-binding protein, regulates transcription of some spore coat genes
Gene name | gerR |
Synonyms | ylbO |
Essential | no |
Product | unknown |
Function | spore coat formation and resistance of spores to lysozyme |
MW, pI | 22 kDa, 7.109 |
Gene length, protein length | 579 bp, 193 aa |
Immediate neighbours | rpmF, ylbP |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU15090
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O34549
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: gerR (according to DBTBS)
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References