Difference between revisions of "YcnJ"

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(Expression and regulation)
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* '''Interactions:'''
 
* '''Interactions:'''
  
* '''Localization:'''
+
* '''Localization:''' cell membrane [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
  
 
=== Database entries ===
 
=== Database entries ===
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* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
  
* '''Regulation:''' eightfold induction under copper-limiting conditions ([[YcnK]], [[CsoR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
+
* '''Regulation:'''  
 +
** eightfold induction under copper-limiting conditions ([[YcnK]], [[CsoR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
  
* '''Regulatory mechanism:''' [[YcnK]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
+
* '''Regulatory mechanism:'''  
 +
** [[YcnK]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/19168619 PubMed]
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
  
<pubmed>19168619,,19168619, </pubmed>
+
<pubmed>19168619, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:45, 8 April 2010

  • Description: copper transporter

Gene name ycnJ
Synonyms
Essential no
Product copper transporter
Function uptake of copper
MW, pI 59 kDa, 10.098
Gene length, protein length 1623 bp, 541 aa
Immediate neighbours ycnI, ycnK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcnJ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU03950

Phenotypes of a mutant

growth-defective under copper-limiting conditions PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: uptake of copper PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
    • eightfold induction under copper-limiting conditions (YcnK, CsoR) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Mohamed Marahiel, Marburg University, Germany homepage

Your additional remarks

References