Difference between revisions of "SpoIID"
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| − | * '''Description:''' required for complete dissolution of the asymmetric septum <br/><br/> | + | * '''Description:''' cell wall hydrolase (lytic transglycosylase), required for complete dissolution of the asymmetric septum <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || lytic transglycosylase |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || sporulation | |style="background:#ABCDEF;" align="center"|'''Function''' || sporulation | ||
| Line 52: | Line 52: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' degrades the glycan strands of the peptidoglycan into disaccharide units {{PubMed|20159959}}, enhances [[SpoIIP]] activity {{PubMed|20159959}} |
* '''Protein family:''' | * '''Protein family:''' | ||
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''Interactions:''' [[SpoIID]]-[[SpoIIP]] {{PubMed|20159959}} |
| − | * '''Localization:''' | + | * '''Localization:''' cell membrane {{PubMed|20159959}} |
=== Database entries === | === Database entries === | ||
| Line 120: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>17376078,1946462,11886548,15752199 3011962 15699190, 15383836 </pubmed> | + | <pubmed>17376078,1946462,11886548,15752199 3011962 15699190, 15383836 20159959 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 12:07, 18 February 2010
- Description: cell wall hydrolase (lytic transglycosylase), required for complete dissolution of the asymmetric septum
| Gene name | spoIID |
| Synonyms | spoIIC |
| Essential | no |
| Product | lytic transglycosylase |
| Function | sporulation |
| MW, pI | 37 kDa, 9.764 |
| Gene length, protein length | 1029 bp, 343 aa |
| Immediate neighbours | ywmC, murAA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU36750
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: degrades the glycan strands of the peptidoglycan into disaccharide units PubMed, enhances SpoIIP activity PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane PubMed
Database entries
- Structure:
- UniProt: P07372
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIID PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
