Difference between revisions of "OpuBA"
| Line 58: | Line 58: | ||
* '''Protein family:''' ABC transporter family (according to Swiss-Prot) | * '''Protein family:''' ABC transporter family (according to Swiss-Prot) | ||
| − | * '''Paralogous protein(s):''' | + | * '''Paralogous protein(s):''' [[OpuCA]] |
=== Extended information on the protein === | === Extended information on the protein === | ||
| Line 89: | Line 89: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[opuBA]]-[[opuBB]]-[[opuBC]]-[[opuBD]]'' {{PubMed|10216873}} | ||
| − | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|10216873}} | |
| − | |||
| − | * '''[[Sigma factor]]:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** induced by salt stress {{PubMed|10216873}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
Revision as of 10:28, 29 December 2009
- Description: choline ABC transporter (ATP-binding protein)
| Gene name | opuBA |
| Synonyms | proV |
| Essential | no |
| Product | choline ABC transporter (ATP-binding protein) |
| Function | compatible solute transport |
| Metabolic function and regulation of this protein in SubtiPathways: Stress | |
| MW, pI | 42 kDa, 5.654 |
| Gene length, protein length | 1143 bp, 381 aa |
| Immediate neighbours | opuBB, yvaV |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU33730
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ABC transporter family (according to Swiss-Prot)
- Paralogous protein(s): OpuCA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: Q45460
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- induced by salt stress PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
R M Kappes, B Kempf, S Kneip, J Boch, J Gade, J Meier-Wagner, E Bremer
Two evolutionarily closely related ABC transporters mediate the uptake of choline for synthesis of the osmoprotectant glycine betaine in Bacillus subtilis.
Mol Microbiol: 1999, 32(1);203-16
[PubMed:10216873]
[WorldCat.org]
[DOI]
(P p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)
G Nau-Wagner, J Boch, Le Good JA, E Bremer
High-affinity transport of choline-O-sulfate and its use as a compatible solute in Bacillus subtilis.
Appl Environ Microbiol: 1999, 65(2);560-8
[PubMed:9925583]
[WorldCat.org]
[DOI]
(P p)
