Difference between revisions of "DesK"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 1: Line 1:
* '''Description:''' two-component sensor kinase, regulation of  cold shock expression of ''[[des]]'' <br/><br/>
+
* '''Description:''' [[two-component systems|two-component]] sensor kinase, regulation of  cold shock expression of ''[[des]]'' <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || two-component sensor kinase (NarL family)  
+
|style="background:#ABCDEF;" align="center"| '''Product''' || [[two-component systems|two-component]] sensor kinase (NarL family)  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of  cold shock expression of ''[[des]]''
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of  cold shock expression of ''[[des]]''
Line 54: Line 54:
 
* '''Catalyzed reaction/ biological activity:''' ATP + protein L-histidine = ADP + protein N-phospho-L-histidine (according to Swiss-Prot)  
 
* '''Catalyzed reaction/ biological activity:''' ATP + protein L-histidine = ADP + protein N-phospho-L-histidine (according to Swiss-Prot)  
  
* '''Protein family:''' peptidase S66 family (according to Swiss-Prot)
+
* '''Protein family:'''  
  
 
* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''

Revision as of 20:52, 27 November 2009

  • Description: two-component sensor kinase, regulation of cold shock expression of des

Gene name desK
Synonyms yocF
Essential no
Product two-component sensor kinase (NarL family)
Function regulation of cold shock expression of des
MW, pI 42 kDa, 9.428
Gene length, protein length 1110 bp, 370 aa
Immediate neighbours des, desR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YocF context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU19190

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + protein L-histidine = ADP + protein N-phospho-L-histidine (according to Swiss-Prot)
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Mohamed Marahiel, Marburg University, Germany homepage

Your additional remarks

References