Difference between revisions of "YhbH"
| Line 1: | Line 1: | ||
| − | * '''Description:''' SigE-dependent sporulation gene <br/><br/> | + | * '''Description:''' [[SigE]]-dependent sporulation gene <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 89: | Line 89: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''yhbH'' {{PubMed|9579061}} |
| − | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,12662922}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 119: | Line 119: | ||
=References= | =References= | ||
| − | <pubmed>12662922,,14523133, </pubmed> | + | <pubmed>12662922,9579061 ,14523133, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:44, 2 September 2009
- Description: SigE-dependent sporulation gene
| Gene name | yhbH |
| Synonyms | yzdC |
| Essential | no |
| Product | unknown |
| Function | sporulation |
| MW, pI | 45 kDa, 6.101 |
| Gene length, protein length | 1176 bp, 392 aa |
| Immediate neighbours | prkA, yhbI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU08980
Phenotypes of a mutant
defect in sporulation PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: UPF0229 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P45742
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yhbH PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Andrea Feucht, Louise Evans, Jeff Errington
Identification of sporulation genes by genome-wide analysis of the sigmaE regulon of Bacillus subtilis.
Microbiology (Reading): 2003, 149(Pt 10);3023-3034
[PubMed:14523133]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Shane T Jensen, Erin M Conlon, Christiaan van Ooij, Jessica Silvaggi, José Eduardo González-Pastor, Masaya Fujita, Sigal Ben-Yehuda, Patrick Stragier, Jun S Liu, Richard Losick
The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.
J Mol Biol: 2003, 327(5);945-72
[PubMed:12662922]
[WorldCat.org]
[DOI]
(P p)
Michiel A Noback, Siger Holsappel, Rense Kiewiet, Peter Terpstra, Rolf Wambutt, Holger Wedler, Gerard Venema, Sierd Bron
The 172 kb prkA-addAB region from 83 degrees to 97 degrees of the Bacillus subtilis chromosome contains several dysfunctional genes, the glyB marker, many genes encoding transporter proteins, and the ubiquitous hit gene.
Microbiology (Reading): 1998, 144 ( Pt 4);859-875
[PubMed:9579061]
[WorldCat.org]
[DOI]
(P p)
