Difference between revisions of "YdbM"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''ydbM'' | + | * '''Operon:''' ''ydbM'' (according to [http://dbtbs.hgc.jp/COG/prom/ydbM.html DBTBS]) |
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| − | * '''Regulation:''' | + | * '''Regulation:''' |
** repressed in the presence of cysteine ([[CymR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/16513748 PubMed] | ** repressed in the presence of cysteine ([[CymR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/16513748 PubMed] | ||
| − | * '''Regulatory mechanism:''' | + | * '''Regulatory mechanism:''' |
** [[CymR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16513748 PubMed] | ** [[CymR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16513748 PubMed] | ||
Revision as of 20:30, 20 August 2009
- Description: acyl-CoA dehydrogenase
| Gene name | ydbM |
| Synonyms | |
| Essential | no |
| Product | acyl-CoA dehydrogenase |
| Function | sulphur metabolism |
| MW, pI | 41 kDa, 5.721 |
| Gene length, protein length | 1143 bp, 381 aa |
| Immediate neighbours | ydbL, fbpB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU04520
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: acyl-CoA dehydrogenase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P96608
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ydbM (according to DBTBS)
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
