Difference between revisions of "XynP"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[xynP]]- | + | * '''Operon:''' ''[[xynP]]-xynB'' (according to [http://dbtbs.hgc.jp/COG/prom/xynPB.html DBTBS]) |
| − | * '''[[Sigma factor]]:''' [[SigA]] | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|9973552}} |
| − | * '''Regulation:''' | + | * '''Regulation:''' |
| + | ** carbon catabolite repression ([[CcpA]]) {{PubMed|9973552}} | ||
| + | ** induction by xylose ([[XylR]]) {{PubMed|9973552}} | ||
| − | * '''Regulatory mechanism:''' [[CcpA]]: transcription repression | + | * '''Regulatory mechanism:''' |
| + | ** [[CcpA]]: transcription repression {{PubMed|9973552}} | ||
| + | **[[XylR]]: transcription repression {{PubMed|9973552}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 121: | Line 125: | ||
=References= | =References= | ||
| − | <pubmed>,,18757537 , </pubmed> | + | |
| + | ==Carbon catabolite repression== | ||
| + | <pubmed>,,18757537 , 9973552</pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:30, 16 August 2009
- Description: beta-xyloside permease
| Gene name | xynP |
| Synonyms | ynaJ |
| Essential | no |
| Product | beta-xyloside permease |
| Function | xylan utilization |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 51 kDa, 8.579 |
| Gene length, protein length | 1389 bp, 463 aa |
| Immediate neighbours | ynaI, xynB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU17570
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P94488
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Carbon catabolite repression
