Difference between revisions of "Rnz"
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* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2FK6 2FK6] (in complex with tRNA-Thr), [http://www.rcsb.org/pdb/explore.do?structureId=1Y44 1Y44] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2FK6 2FK6] (in complex with tRNA-Thr), [http://www.rcsb.org/pdb/explore.do?structureId=1Y44 1Y44] | ||
− | * ''' | + | * '''UniProt:''' [http://www.uniprot.org/uniprot/P54548 P54548] |
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU23840] | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU23840] |
Revision as of 13:28, 20 July 2009
- Description: RNase Z
Gene name | rnz |
Synonyms | yqjK |
Essential | yes PubMed |
Product | endoribonuclease Z |
Function | processing of CCA-less tRNA precursors |
MW, pI | 33 kDa, 5.805 |
Gene length, protein length | 921 bp, 307 aa |
Immediate neighbours | yqjL, zwf |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU23840
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs (according to Swiss-Prot) processing of CCA-less tRNA precursors
- Protein family: RNase Z family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- UniProt: P54548
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Ciaran Condon, IBPC, Paris, France Homepage
Your additional remarks
References