Difference between revisions of "YpiF"

From SubtiWiki
Jump to: navigation, search
Line 37: Line 37:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU22570
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 82: Line 82:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P54391 P54391]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P54391 P54391]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU22570 BSU22570]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU22570]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 10:49, 3 June 2009

  • Description: unknown

Gene name ypiF
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 17 kDa, 5.09
Gene length, protein length 444 bp, 148 aa
Immediate neighbours qcrA, ypiB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YpiF context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU22570

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: glyoxalase I family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation: repressed by glucose (6.7-fold) (CcpA) PubMed, subject to carbon catabolite repression (7-fold: CcpA) PubMed
  • Regulatory mechanism: CcpA: transcription repression, CcpA: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Blencke et al. (2003) Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways. Metab Eng. 5: 133-149 PubMed
  2. Blencke, H.-M., Homuth, G., Ludwig, H., Mäder, U., Hecker, M. & Stülke, J. (2003) Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways. Metab. Engn. 5: 133-149. PubMed
  3. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed