Difference between revisions of "Cca"

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(Basic information/ Evolution)
Line 56: Line 56:
 
* '''Catalyzed reaction/ biological activity:''' ATP + tRNA(n) = diphosphate + tRNA(n+1) (according to Swiss-Prot)  
 
* '''Catalyzed reaction/ biological activity:''' ATP + tRNA(n) = diphosphate + tRNA(n+1) (according to Swiss-Prot)  
  
* '''Protein family:'''
+
* '''Protein family:''' the protein is similar to the [[E. coli]] poly(A) polymerase
  
 
* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''

Revision as of 07:06, 31 May 2009

  • Description: tRNA nucleotidyltransferase

Gene name cca
Synonyms papS, ypjI
Essential yes PubMed
Product tRNA nucleotidyltransferase
Function tRNA modification
MW, pI 45 kDa, 8.041
Gene length, protein length 1191 bp, 397 aa
Immediate neighbours birA, ypjH
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Cca context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + tRNA(n) = diphosphate + tRNA(n+1) (according to Swiss-Prot)
  • Protein family: the protein is similar to the E. coli poly(A) polymerase
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 1MIV (Geobacillus stearothermophilus 44% identity)

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed