Difference between revisions of "Int"

From SubtiWiki
Jump to: navigation, search
(Created page with '* '''Description:''' similar to integrase <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''int'' |- |sty...')
 
Line 1: Line 1:
* '''Description:''' similar to integrase <br/><br/>
+
* '''Description:''' integrase <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
+
|style="background:#ABCDEF;" align="center"| '''Product''' || integrase
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
+
|style="background:#ABCDEF;" align="center"|'''Function''' || excision of the conjugative transposon ICEBs1 from the trnS-leu2 locus
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 43 kDa, 9.764   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 43 kDa, 9.764   

Revision as of 09:26, 11 May 2009

  • Description: integrase

Gene name int
Synonyms ydcL
Essential no
Product integrase
Function excision of the conjugative transposon ICEBs1 from the trnS-leu2 locus
MW, pI 43 kDa, 9.764
Gene length, protein length 1104 bp, 368 aa
Immediate neighbours trnS-Leu2, immA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdcL context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: 'phage' integrase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed